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The exhaustive list of topics in Computational Biology using Python in which we provide Help with Homework Assignment and Help with Project is as follows:

  • Phylogenetic Inference
  • UPGMA
  • Newick Notation
    • Phylogenetic Trees
    • Trees
    •  Data Structure
    •  Parsing Function
  • Parsimony
  •  Sankoff Downpass Algorithm
  • Fitch's Up Pass
    • Greedy Algorithm for Trying Trees
  • The Protein Design Problem.
  • MM/PD
  • Computational Methods vs. Exact Methods
  •  Reaction Rate and Reaction Propensity
  •  Achieving Faster Computation
  • Biological Databases
  • Rapid Database Search
  • Regulatory Motif Discovery
  • Probabilistic Motif Finding
  • Sequence Alignment
  • Markov Chains and Hidden Markov Models
  • Gene Finding
  • Genome Evolution and Phylogenetic Trees
  • Genome Duplication
  • Gene Expression Clustering
  • Gene Network and Inference
  • Scale-free Networks
  • Comparative Genomics