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The exhaustive list of topics in Computational Molecular Biology in which we provide Help with Homework Assignment and Help with Project is as follows:

  • Central Dogma
  • Enumerative Solutions: Partial Digest Problem and Median Strings
  • Partial Digest Problem
  • Motifs and Median Strings
  • Dynamic Programming: Sequence Alignments
  • Global Alignment
  • Local Alignment
  • Spliced Alignment
  • More Efficient Alignment
  • Graph Theory: Sequencing Genes and Proteins
  • Genomics and SBH Graphs
  • Peptide Graphs
  • Pattern Matching: Exact Matches, Gapless Alignments, and BLAST
  • Exact Pattern Matching
  • Suffix Trees
  • Suffix Arrays and BWTs
  • Clustering: Microarrays and Phylogeny
  • Trees
  • Neighbor Joining
  • Review of Phylogenetic Analysis
  • Coalescent Theory in Biology
  • Microarrays
  • Probabilistic Models and Machine Learning: Gene Annotation and Evolution
  • Hidden Markov Models
  • Gibbs Sampling
  • Random Projections
  • MCMC and Bayesian Networks
  • Horizons
  • Protein Structure
  • Haplotype Mapping